Publications of J.
Select a view.61 publication entries, 47 of them (printed in bold in the list) acknowledge the project support.
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Paper (reviewed)
| Antolik and Bednar 2011 | Antolik, J. and Bednar, J.A. | Development of maps of simple and complex cells in the primary visual cortex | Front. Comput. Neurosci. (2011) 5:17 doi:10.3389/fncom.2011.00017 |
abstract, fulltext |
| Antolik and Davison 2013 | Antolik, J. and Davison, A.P. | Integrated workflows for spiking neuronal network simulations | Front. Neuroinform. (2013) 7:34 doi:10.3389/fninf.2013.00034 |
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| Berthet et al. 2012 | Berthet, P., Hellgren-Kotaleski, J. and Lansner, A. | Action selection performance of a reconfigurable Basal Ganglia model with a Hebbian-Bayesian Go-NoGo connectivity | Front. Behav. Neurosci. (2012) 6:65 doi:10.3389/fnbeh.2012.00065 |
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| Blackman et al 2014 | A. V. Blackman, S. Grabuschnig, R. Legenstein, and P. J. Sjöström | A comparison of manual neuronal reconstruction from biocytin histology or 2-photon imaging: morphometry and computer modeling | Frontiers in neuroanatomy (2014) : 8 doi:10.3389/fnana.2014.00065 |
abstract, fulltext |
| Brüderle et al. 2011 | Brüderle, D., Petrovici, M. A., Vogginger, B., Ehrlich, M., Pfeil, T., Millner, S., Grübl, A., Wendt, K., Müller, E., Schwartz, M.-O., de Oliveira, D. H., Jeltsch, S., Fieres, J., Schilling, M., Müller, P., Breitwieser, O., Petkov, V., Muller, L., Davison, A. P., Krishnamurthy, P., Kremkow, J., Lundqvist, M., Muller, E., Partzsch, J., Scholze, S., Zühl, L., Mayr, C., Destexhe, A., Diesmann, M., Potjans, T. C., Lansner, A., Schüffny, R., Schemmel, J. and Meier, K. | A comprehensive workflow for general-purpose neural modeling with highly configurable neuromorphic hardware systems | Biological Cybernetics (2011) 104(4-5): 263-296 doi:10.1007/s00422-011-0435-9 |
abstract, fulltext |
| Budd and Kisvarday 2013 | Budd, J. and Kisvarday, Z. | How do you wire a brain? | Front. Neuroanat. (2013) 7:14 doi:10.3389/fnana.2013.00014 |
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| Faugeras and Inglis 2015 | Faugeras, O. and Inglis, J. | Stochastic neural field equations: a rigorous footing | Journal of Mathematical Biology (2015) 71(2): 259-300 doi:10.1007/s00285-014-0807-6 |
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| Faugeras and Maclaurin 2014a | Faugeras, O. and Maclaurin, J. | Asymptotic description of stochastic neural networks. I. Existence of a large deviation principle | Comptes Rendus Mathematique (2014) 352(10): 841-846 doi:10.1016/j.crma.2014.08.018 |
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| Faye et al. 2013 | Faye, G., Rankin, J. and Lloyd, D. J. B. | Localized radial bumps of a neural field equation on the Euclidean plane and the Poincaré disk | Nonlinearity (2013) : 26 doi:10.1088/0951-7715/26/2/437 |
abstract, BibTeX |
| Gerhard et al 2013 | Felipe Gerhard, Tilman Kispersky, Gabrielle J. Gutierrez, Eve Marder, Mark Kramer, Uri Eden | Successful Reconstruction of a Physiological Circuit with Known Connectivity from Spiking Activity Alone | Plos Computational Biology (2013) 9(7): 003138 doi:10.1371/journal.pcbi.1003138 |
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| Helias et al. 2012 | Helias, M., Kunkel, S., Masumoto, G., Igarashi, J., Eppler, J. M., Ishii, S., Fukai, T., Morrison, A. and Diesmann, M. | Supercomputers ready for use as discovery machines for neuroscience | Front. Neuroinform. (2012) 6:26 doi:10.3389/fninf.2012.00026 |
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| Henker et al. 2012 | Henker, S., Partzsch, J. and Schüffny, R. | Accuracy evaluation of numerical methods used in state-of-the-art simulators for spiking neural networks | Journal of Computational Neuroscience (2012) 32(2): 309-326 doi:10.1007/s10827-011-0353-9 |
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| Hermann Touboul 2012 | Hermann, G. and Touboul, J. | Heterogeneous Connections Induce Oscillations in Large-Scale Networks | Phys. Rev. Lett. (2012) 109: 018702 doi:10.1103/PhysRevLett.109.018702 |
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| Ito et al. 2014 | Ito, J., Roy, S., Liu, Y., Cao, Y., Fletcher, M., Lu, L., Boughter, J. D., Grün, S. and Heck, H. | Whisker barrel cortex delta oscillations and gamma power in the awake mouse are linked to respiration | Nature Communications (2014) 5: 3572 doi:10.1038/ncomms4572 |
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| Levy et al. 2013 | Levy, M., Fournier, J. and Frégnac, Y. | The role of delayed suppression during fast and slow contrast adaptation in V1 Simple cells | The Journal of Neuroscience (2013) 33(15): 6388-6400 doi:10.1523/JNEUROSCI.3609-12.2013 |
abstract, fulltext |
| Navaridasa et al. 2013 | Navaridasa, J., Furbera, S., Garsidea, J., Jinb, X., Khanc, M., Lestera, D., Lujã¡na, M., Miguel-Alonsod, J., Painkrasa, E., Pattersona, C., Planaa, L. A., Rasta, A., Richardsa, D., Shib, Y., Templea, S., Wue, J. and Yangf, S. | SpiNNaker: Fault tolerance in a power- and area- constrained large-scale neuromimetic architecture | Parallel Computing (2013) 39(11): 693-708 doi:10.1016/j.parco.2013.09.001 |
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| Partzsch 2011 | Partzsch, J. and Schüffny, R. | Analysing the Scaling of Connectivity in Neuromorphic Hardware and in Models of Neural Networks | IEEE Transactions on Neural Networks (2011) 22(6):919-935 doi:10.1109/TNN.2011.2134109 |
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| Partzsch and Schüffny 2012 | Partzsch, J. and Schüffny, R. | Developing structural constraints on connectivity for biologically embedded neural networks | Biological Cybernetics (2012) 106(3): 191-200 doi:10.1007/s00422-012-0489-3 |
abstract, fulltext |
| Petrovici et al. 2014 | Petrovici, M. A., Vogginger, B., Müller, P., Breitwieser, O., Lundqvist, M., Muller, L., Ehrlich, M., Destexhe, A., Lansner, A., Schüffny, R., Schemmel, J. and Meier, K. | Characterization and Compensation of Network-Level Anomalies in Mixed-Signal Neuromorphic Modeling Platforms | PLoS ONE (2014) 9(10): e108590 doi:10.1371/journal.pone.0108590 |
abstract |
| Pfeil et al. 2012 | Pfeil, T., Grübl, A., Jeltsch, S., Müller, E., Müller, P., Petrovici, M., Schmuker, M., Brüderle, D., Schemmel, J. and Meier, K. | Six networks on a universal neuromorphic computing substrate | Front. Neurosci. (2013) 7:11 (Pre-print: http://arxiv.org/abs/1210.7083) doi:10.3389/fnins.2013.00011 |
abstract |
| Pinotsis et al. 2013 | Pinotsis, D.A., Hansen, E., Friston, K.J. and Jirsa, V.K. | Anatomical connectivity and the resting state activity of large cortical networks | Neuroimage (2013) 65:127-38 doi:10.1016/j.neuroimage.2012.10.016 |
abstract, (fulltext) |
| Probst et al. 2015 | Probst, D., Petrovici, M. A., Bytschok, I., Bill, J., Pecevski, D., Schemmel, J. and Meier, K. | Probabilistic inference in discrete spaces can be implemented into networks of LIF neurons | Front. Comput. Neurosci. (2015) 9:13 doi:10.3389/fncom.2015.00013 |
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| Rezende and Gerstner 2014 | Rezende, D.J. and Gerstner, W. | Stochastic variational learning in recurrent spiking networks | Front. Comput. Neurosci. (2014) 8:38 doi:10.3389/fncom.2014.00038 |
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| Rombouts et al. 2015b | Rombouts, J. O., Bohte, S. M., Martinez-Trujillo, J. and Roelfsema, P. R. | A learning rule that explains how rewards teach attention | Visual Cognition (2015) 33:179-205 doi:10.1080/13506285.2015.1010462 |
abstract |
| Vasquez et al. 2012 | Vasquez, J.-C., Palacios, A., Marre, O., Berry II, M. J. and Cessac, B. | Gibbs distribution analysis of temporal correlations structure in retina ganglion cells | J. Physiol. Paris (2012) 106(4):120-127 doi:10.1016/j.jphysparis.2011.11.001 |
(fulltext), BibTeX |
| Vogels et al 2013 | T. P. Vogels, R. C. Froemke, N. Doyon, M. Gilson, J. S. Haas, R. Liu, A. Maffei, P. Miller, C. J. Wierenga, M. A. Woodin, F. Zenke and H. Sprekeler | Inhibitory synaptic plasticity: spike timing-dependence and putative network function | Frontiers In Neural Circuits (2013) : 7 doi:10.3389/fncir.2013.00119 |
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| Vogginger et al. 2015 | Vogginger, B., Schüffny, R., Lansner, A., Cederström, L., Partzsch, J. and Höppner, S. | Reducing the computational footprint for real-time BCPNN learning | Front. Neurosci. (2015) 9:2 doi:10.3389/fnins.2015.00002 |
abstract, fulltext |
| Yousaf et al. 2013 | M. Yousaf, B. Kriener, J. Wyller, G.T. Einevoll | Generation and annihilation of localized persistent-activity states in a two-population neural-field model | Neural Networks (2013) 46}:75-90 doi:10.1016/j.neunet.2013.04.012 |
abstract |
| Yousaf et al. 2013b | M. Yousaf, J. Wyller, T. Tetzlaff, G.T. Einevoll | Effect of localized input on bump solutions in a two-population neural-field model | Nonlinear Analysis Series B: Real World Applications (2013) 14:997-1025 doi:10.1016/j.nonrwa.2012.08.013 |
abstract |
| Zenke et al. 2015 | Zenke, F., Agnes, E.J. and Gerstner, W. | Diverse synaptic plasticity mechanisms orchestrated to form and retrieve memories in spiking neural networks | Nature Communications (2015) 6: 6922 doi:10.1038/ncomms7922 |
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Review
| Crook et al. 2012 | Crook, S. M., Bednar, J. A., Berger, S., Cannon, R., Davison, A. P., Djurfeldt, M., Eppler, J., Kriener, B., Furber, S., Graham, B., Plesser, H. E., Schwabe, L., Smith, L., Steuber, V. and van Albada, S. | Creating, documenting and sharing network models | Network: Computation in Neural Systems (2012) 23(4): 131-149 doi:10.3109/0954898X.2012.722743 |
abstract, fulltext |
Conference contribution: talk
| Meyes and Ito 2014 | Meyes, R. and Ito, J. | Effects of Complex Background Sceneson Object Selectivity of Single UnitActivities in the Macaque IT cortex | 5th Active Vsion Workshop, Juelich, Germany, 06/11/2014 - 06/13/2014 | |
| Nowke et al. 2013 | Nowke, C., Schmidt, M., van Albada, S. J., Eppler, J. M., Bakker, R., Diesmann, M., Hentschel, B. and Kuhlen, T. | VisNEST - Interactive Analysis of Neural Activity Data | BioVis Symposium at the IEEE BioVis 2013, 13-18 Oct. 2013, Atlanta, Georgia, USA | |
| Schemmel et al. 2012a | Schemmel, J. and Grübl, A. and Kononov, A. and Meier, K. and Millner, S. and Schwartz, M. and Scholze, S. and Schiefer, S. and Hartmann, S. and Partzsch, J. and Mayr, C. and Schüffny, R. | Live Demonstration: A Scaled-Down Version of the BrainScaleS Wafer-Scale Neuromorphic System | IEEE International Symposium on Circuits and Systems 2012 | |
| Tetzlaffet al 2013 | Tetzlaff, T. ; Helias, M. ; Jordan, J. ; Petrovici, M. ; Breitwieser, O. ; Diesmann, M. | Decorrelation of neural-network activity by inhibitory feedback: Mechanism and applications | 22nd Annual Computational Neuroscience Meeting (CNS*2013), workshop on "Functional role of correlations: theory and experiment", CNS13, Paris, France, 07/13/2013 - 07/18/2013 |
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| Thanasoulis et al. 2014a | Thanasoulis, V., Vogginger, B., Partzsch, J. and Schüffny, R. | A Pulse Communication Flow Ready for Accelerated Neuromorphic Experiments | ISCAS (2014): 265-268 doi:10.1109/ISCAS.2014.6865116 |
abstract |
Conference contribution: poster
| Antolik and Davison 2013b | Antolik, J. and Davison, A.P. | Mozaik: a framework for model construction, simulation, data analysis and visualization for large-scale spiking neural circuit models | Neuroinformatics 2013, Stockholm, Sweden, August (2013) doi:10.3389/conf.fninf.2013.09.00018 |
abstract |
| Bakkeret al 2012 | Bakker, R. ; Denker, M. ; Diesmann, M. ; Eppler, J. M. ; Grün, S. ; Grytskyy, D. ; Helias, M. ; Ito, J. ; Maximov, A. ; Schmidt, M. ; Tetzlaff, T. ; Torre, E. ; van Albada, S. ; Wiebelt, B. ; Zehl, L. | Planned activities in Jülich | BrainScales Conference, Jülich, Germany, 03/19/2012 |
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| Eppler et al. 2012 | Eppler, J. M., Djurfeldt, M., Muller, E., Diesmann, M. and Davison, A. | Combining simulator independent network descriptions with run-time interoperability based on PyNN and MUSIC | In Conference Abstract: 5th INCF Congress of Neuroinformatics, Front. Neuroinform. (2012) | |
| EpplerM et al 2013 | Eppler, J. M. ; Kunkel, S. ; Helias, M. ; Zaytsev, Y. ; Plesser, H. E. ; Gewaltig, M.-O. ; Morrison, A. ; Diesmann, M. | 20 years of NEST: a mature brain simulator | INM Retreat 2013, Jülich, Germany, 07/02/2013 - 07/03/2013 |
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| EpplerM et al. 2012 | Eppler, J. M. ; Wiebelt, B. ; Zaytsev, Y. ; Diesmann, M. | The NEST software development infrastructure | INM Retreat 2012, Jülich, Germany, 07/03/2012 - 07/04/2012 |
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| Habenschuss et al. 2012 | Habenschuss, S., Bill, J. and Nessler, B. | Homeostatic plasticity in Bayesian spiking networks as Expectation Maximization with posterior constraints | in Advances in Neural Information Processing Systems 25 (2012): 782-790 | abstract, fulltext |
| Itoet al 2013 | Ito, J. ; Mukai, M. ; Tamura, H. ; Grün, S. | Effects of Complex Background on the Object Selective Response of Current Source in the Inferior Temporal Cortex of Macaque Monkeys | Bernstein Conference 2013, Tübingen, Germany, 09/25/2013 - 09/27/2013 |
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| Itoet al 2013b | Ito, J. ; Mukai, M. ; Yamane, Y. ; Tamura, H. ; Grün, S. | Effects of complex background scene on object selectivity of current source density activities in the macaque inferior temporal cortex | 36th European Conference on Visual Perception, ECVP2013, Bremen, Germany, 08/25/2013 - 08/29/2013 |
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| Jordanet al 2013 | Jordan, J. ; Tetzlaff, T. ; Breitwieser, O. ; Petrovici, M. ; Schemmel, J. ; Diesmann, M. ; Meier, K. | Generation of uncorrelated noise by recurrent neural networks | 3rd BrainScaleS Plenary meeting, Marseille, France, 03/21/2013 - 03/22/2013 |
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| Jordanet al 2013b | Jordan, J. ; Tetzlaff, T. ; Breitwieser, O. ; Petrovici, M. ; Schemmel, J. ; Diesmann, M. ; Meier, K. | Generation of uncorrelated noise by recurrent neural networks | 10th Goettingen Meeting of the German Neuroscience Society, Goettingen, Germany, 03/13/2013 - 03/16/2013 |
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| Jordanet al 2015 | Jordan, J. ; Pfeil, T. ; Tetzlaff, T. ; Grübl, A. ; Schemmel, J. ; Diesmann, M. ; Meier, K. | The effect of heterogeneity on decorrelation mechanisms in spiking neural networks: a neuromorphic-hardware study | 11th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/18/2015 - 03/21/2015 | |
| Kunkel et al 2013 | S. Kunkel, M. Schmidt, J. M. Eppler, H. E. Plesser, J. Igarashi, G. Masumoto, T. Fukai, S. Ishii, A. Morrison, M. Diesmann, and M. Helias. | From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations. | BMC Neuroscience (2013) 14(Suppl 1):P163 doi:10.1186/1471-2202-14-S1-P163 |
abstract |
| Kunkelet al 2013b | Kunkel, S. ; Schmidt, M. ; Eppler, J. M. ; Igarashi, J. ; Masumoto, G. ; Fukai, T. ; Ishii, S. ; Plesser, H. E. ; Morrison, A. ; Diesmann, M. ; Helias, M. | Supercomputers ready for use as discovery machines for neuroscience | 10th Meeting of the German Neuroscience Society, NWG 2013, Goettingen, Germany, 03/13/2013 - 03/18/2013 |
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| Maksimovet al 2012 | Maksimov, A. ; van Albada, S. J. ; Diesmann, M. | Understanding global whisker motion detection through large-scale simulation of the rodent whisker system | Okinawa Computational Neuroscience Course 2012 Okinawa, Japan, 2012-06-11" |
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| Meyes and Ito 2014b | Meyes, R. and Ito, J. | Effects of Complex Background Sceneson Object Selectivity of Single Unit Activities in the Macaque IT cortex | 5th Active Vsion Workshop, Juelich, Germany, 06/11/2014 - 06/13/2014 | |
| Millner et al. 2012 | Millner, S., Hartel, A., Schemmel, J. and Meier, K. | Towards biologically realistic multi-compartment neuron model emulation in analog VLSI | ESANN 2012 proceedings, European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning. Bruges (Belgium), 25-27 April 2012 | fulltext |
| Mukaiet al 2013 | Mukai, M. ; Yamane, Y. ; Ito, J. ; Grün, S. ; Tamura, H. | Effects of complex background scene on object selectivity ofsingle-unit activities in the macaque inferior temporal cortex | 36th European Conference on Visual Perception, ECVP2013, Bremen, Germany, 08/25/2013 - 08/29/2013 |
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| Nowkeet al 2013 | Nowke, C. ; Hentschel, B. ; Kuhlen, T. ; Schmidt, M. ; van Albada, S. ; Eppler, J. M. ; Bakker, R. ; Diesmann, M. | Interactive visualization of brain-scale spiking activity | Twenty Second Annual Computational Neuroscience Meeting, CNS 2013, Paris, France, 07/13/2013 - 07/18/2013 |
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| Partzsch et al. 2012 | Partzsch, J. and Mayr, C. and Schiefer, S. and Hartmann, S. and Scholze, S. and Schüffny, R. | Highly Integrated Packet-Based Communication in a Neuromorphic Wafer System | University Booth at DATE (Design, Automation and Test in Europe) 2012 | |
| Pfeil el al. 2013 | Pfeil, T., Scherzer, A.-C., Schemmel, J. and Meier, K. | Neuromorphic learning towards nano second precision | Neural Networks (IJCNN), The 2013 International Joint Conference on (2013): 1-5 doi:10.1109/IJCNN.2013.6706828 |
abstract, fulltext |
| Plesser et al 2013 | H. E. Plesser, J. M. Eppler, and M.-O. Gewaltig. | 20 years of NEST: A mature brain simulator. | Frontiers in Neuroinformatics. Conference Abstract: Neuroinformatics 2013, page 227, Stockholm, 2013 | abstract |
| Strokovet al 2013 | Strokov, S. ; Ito, J. ; Tamura, H. ; Grün, S. | Spatio-temporal modulations of object selectivity in the inferior temporal cortex | Bernstein Conference 2013, Tübingen, Germany, 09/25/2013 - 09/27/2013 |
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| Suzukiet al 2013 | Suzuki, M. ; Yamane, Y. ; Ito, J. ; Strokov, S. ; Fujita, I. ; Maldonado, P. ; Grün, S. ; Tamura, H. | Factors affecting human gaze behavior: an analysis with complex natural scenes with superimposed object images | 36th European Conference on Visual Perception, ECVP2013, Bremen, Germany, 08/25/2013 - 08/29/2013 |
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| thanasoulis11 | Thanasoulis, V. and Hartmann, S. and Ehrlich, M. and Partzsch, J. and Mayr, C. and Schüffny, R. | Long-Term Pulse Stimulation and Recording in an Accelerated Neuromorphic System | Dresdner Arbeitstagung Schaltungs und Systementwurf (DASS 2011), p. 72-77 |
Other
| Kunkel et al. 2012 | Kunkel, S., Helias, M., Potjans, T. C., Eppler, J. M., Plesser, H.E., Diesmann, M. and Morrison, A. | Memory Consumption of Neuronal Network Simulators at the Brain Scale | in Binder K, Münster G, Kremer M (Eds) NIC Symposium 2012 Proceedings NIC Series Vol. 45, page 81, Jülich, Germany, ISBN 978-3-89336-758-0 | fulltext |
